Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TLR4O00206 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.2■□□□□ 0.18
TLR4O00206 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 AC009407.1-201ENST00000568958 598 ntBASIC16.2■□□□□ 0.18
TLR4O00206 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 AL139011.1-202ENST00000642063 584 ntBASIC16.2■□□□□ 0.18
TLR4O00206 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.2■□□□□ 0.18
TLR4O00206 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TLR4O00206 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TLR4O00206 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR4O00206 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TLR4O00206 AL391256.1-201ENST00000443260 1855 ntBASIC16.19■□□□□ 0.18
TLR4O00206 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 GK-202ENST00000378941 458 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR4O00206 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR4O00206 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR4O00206 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR4O00206 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.19■□□□□ 0.18
TLR4O00206 AP002490.2-201ENST00000524791 560 ntBASIC16.19■□□□□ 0.18
TLR4O00206 CR383656.12-201ENST00000549567 513 ntBASIC16.19■□□□□ 0.18
TLR4O00206 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.19■□□□□ 0.18
TLR4O00206 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR4O00206 AC106886.4-201ENST00000623557 2502 ntBASIC16.19■□□□□ 0.18
TLR4O00206 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.19■□□□□ 0.18
TLR4O00206 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
TLR4O00206 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.19■□□□□ 0.18
TLR4O00206 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TLR4O00206 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.18■□□□□ 0.18
TLR4O00206 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TLR4O00206 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TLR4O00206 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TLR4O00206 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TLR4O00206 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TLR4O00206 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TLR4O00206 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.18■□□□□ 0.18
TLR4O00206 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.18■□□□□ 0.18
TLR4O00206 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms