Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.39■□□□□ 0.53
DDX39AO00148 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX39AO00148 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX39AO00148 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DDX39AO00148 AC055876.3-201ENST00000431496 288 ntBASIC18.39■□□□□ 0.53
DDX39AO00148 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.39■□□□□ 0.53
DDX39AO00148 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.39■□□□□ 0.53
DDX39AO00148 AC138649.4-201ENST00000612222 287 ntBASIC18.39■□□□□ 0.53
DDX39AO00148 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 AL662844.4-201ENST00000606367 2838 ntBASIC18.39■□□□□ 0.53
DDX39AO00148 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX39AO00148 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX39AO00148 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX39AO00148 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX39AO00148 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 AL353705.2-201ENST00000428243 662 ntBASIC18.38■□□□□ 0.53
DDX39AO00148 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.38■□□□□ 0.53
DDX39AO00148 AC097493.3-201ENST00000509725 367 ntBASIC18.38■□□□□ 0.53
DDX39AO00148 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX39AO00148 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX39AO00148 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX39AO00148 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX39AO00148 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDX39AO00148 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
DDX39AO00148 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.37■□□□□ 0.53
DDX39AO00148 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.37■□□□□ 0.53
DDX39AO00148 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX39AO00148 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.37■□□□□ 0.53
DDX39AO00148 SPCS2P1-201ENST00000561636 679 ntBASIC18.37■□□□□ 0.53
DDX39AO00148 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 AC007967.4-201ENST00000614700 386 ntBASIC18.37■□□□□ 0.53
DDX39AO00148 SPDYE12P-201ENST00000618416 771 ntBASIC18.37■□□□□ 0.53
DDX39AO00148 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
DDX39AO00148 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX39AO00148 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX39AO00148 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX39AO00148 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX39AO00148 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 1321.9 ms