Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 AC006538.1-201ENST00000567905 1585 ntBASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NPIPA3F8WFD2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 FLJ38576-201ENST00000623820 2459 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 TREML5P-201ENST00000421694 576 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AC140878.1-201ENST00000565277 250 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 FO538757.1-201ENST00000623083 1397 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AGGF1P2-201ENST00000426656 2106 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 AL671710.1-201ENST00000610245 2349 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 HLA-A-202ENST00000376806 1854 ntBASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NPIPA3F8WFD2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms