Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 AL596087.1-201ENST00000400979 1969 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 AL139010.1-201ENST00000454878 894 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 AC027796.2-201ENST00000575326 344 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 RN7SL828P-201ENST00000607615 303 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 OR6D1P-203ENST00000641209 4860 ntBASIC13.13□□□□□ -0.31
ODF3BA8MYP8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.13□□□□□ -0.31
ODF3BA8MYP8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 HAUS4P1-201ENST00000406739 1145 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AC069120.2-201ENST00000524091 540 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AL158211.3-201ENST00000607385 239 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AL133215.2-201ENST00000609242 977 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AC093512.1-201ENST00000617969 520 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 AL662844.4-201ENST00000606367 2838 ntBASIC13.12□□□□□ -0.31
ODF3BA8MYP8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3BA8MYP8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3BA8MYP8 HLA-V-204ENST00000476601 1289 ntBASIC13.11□□□□□ -0.31
ODF3BA8MYP8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms