Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 AC005622.1-201ENST00000636801 1703 ntBASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.27■□□□□ 0.19
TBC1D3FA6NER0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AC063926.2-201ENST00000623766 1308 ntBASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 CRB3P1-201ENST00000449338 276 ntBASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AC009407.1-201ENST00000568958 598 ntBASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 AL035252.4-201ENST00000624174 288 ntBASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3FA6NER0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AL844908.2-201ENST00000609461 460 ntBASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AC008738.7-201ENST00000609744 511 ntBASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 RNF216P1-203ENST00000404404 2427 ntBASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3FA6NER0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms