Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.42■□□□□ 0.38
RCCD1A6NED2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RCCD1A6NED2 AC006058.4-201ENST00000624016 1670 ntBASIC17.42■□□□□ 0.38
RCCD1A6NED2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 HCG4P8-203ENST00000443049 980 ntBASIC17.41■□□□□ 0.38
RCCD1A6NED2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 OR7E14P-202ENST00000530490 1290 ntBASIC17.41■□□□□ 0.38
RCCD1A6NED2 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 CLEC4GP1-201ENST00000596555 870 ntBASIC17.41■□□□□ 0.38
RCCD1A6NED2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.41■□□□□ 0.38
RCCD1A6NED2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCCD1A6NED2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 U82695.1-201ENST00000635752 1889 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 UPK3BP1-201ENST00000428678 509 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 FAM185BP-201ENST00000443595 716 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 AC004790.2-201ENST00000623588 572 ntBASIC17.4■□□□□ 0.38
RCCD1A6NED2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCCD1A6NED2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.4■□□□□ 0.38
RCCD1A6NED2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RCCD1A6NED2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.39■□□□□ 0.38
RCCD1A6NED2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RCCD1A6NED2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.39■□□□□ 0.38
RCCD1A6NED2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.39■□□□□ 0.37
RCCD1A6NED2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RCCD1A6NED2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms