Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KRT8P49-201ENST00000604166 1432 ntBASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA9Q9Y5G4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 AP3S2-216ENST00000617003 1561 ntBASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGA9Q9Y5G4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 AC005915.1-201ENST00000624912 2018 ntBASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 CYP2A7P1-201ENST00000595391 815 ntBASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA9Q9Y5G4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 NME2P1-201ENST00000426182 414 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AL596325.1-201ENST00000563991 1082 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AC004233.3-201ENST00000607794 1269 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AC003101.2-201ENST00000612557 442 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 SPDYE12P-201ENST00000618416 771 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC00895-201ENST00000629028 1637 ntBASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA9Q9Y5G4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA9Q9Y5G4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms