Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 MIR661-201ENST00000384842 89 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC236430.1-201ENST00000402231 743 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AL353705.2-201ENST00000428243 662 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 COX20P2-201ENST00000452636 358 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 RN7SL204P-201ENST00000582831 262 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 AC020765.3-201ENST00000613051 740 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 SPDYE12P-201ENST00000618416 771 ntBASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB2Q9Y5E7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AL031731.1-201ENST00000642131 2094 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 GPAA1P2-202ENST00000606848 1787 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC002472.2-201ENST00000442739 958 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 RNA5SP410-201ENST00000516285 106 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AL590560.3-201ENST00000623350 461 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 AC100757.3-201ENST00000622361 1406 ntBASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB2Q9Y5E7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB2Q9Y5E7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms