Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC079316.1-201ENST00000548397 411 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MIR3615-201ENST00000581999 87 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC103810.3-201ENST00000583567 96 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AL133373.2-201ENST00000623187 2828 ntBASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 RPL13AP25-201ENST00000484130 612 ntBASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AC022137.2-201ENST00000503482 481 ntBASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 AC005695.3-201ENST00000614522 232 ntBASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PHRF1Q9P1Y6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 REXO1L8P-201ENST00000604378 1897 ntBASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 IGHJ2P-201ENST00000454480 60 ntBASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PHRF1Q9P1Y6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 AC136604.1-201ENST00000418535 575 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 CNN2P8-201ENST00000421872 913 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 AC016694.1-201ENST00000434179 700 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 KRT18P43-201ENST00000469825 1281 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 BNIP3P1-202ENST00000550043 1585 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 AC007613.1-201ENST00000572811 2597 ntBASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.41■■□□□ 1.02
PHRF1Q9P1Y6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms