Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.62■□□□□ 0.25
HACD3Q9P035 MTDHP5-201ENST00000598980 586 ntBASIC16.62■□□□□ 0.25
HACD3Q9P035 AL078644.1-201ENST00000609881 752 ntBASIC16.62■□□□□ 0.25
HACD3Q9P035 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HACD3Q9P035 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 AC092919.2-201ENST00000623631 1645 ntBASIC16.62■□□□□ 0.25
HACD3Q9P035 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 WASH6P-202ENST00000359512 1437 ntBASIC16.62■□□□□ 0.25
HACD3Q9P035 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 PCDHA1-201ENST00000378133 2726 ntBASIC16.61■□□□□ 0.25
HACD3Q9P035 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HACD3Q9P035 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.61■□□□□ 0.25
HACD3Q9P035 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.61■□□□□ 0.25
HACD3Q9P035 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.61■□□□□ 0.25
HACD3Q9P035 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.61■□□□□ 0.25
HACD3Q9P035 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HACD3Q9P035 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.61■□□□□ 0.25
HACD3Q9P035 AL596257.1-201ENST00000641463 2694 ntBASIC16.61■□□□□ 0.25
HACD3Q9P035 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.6■□□□□ 0.25
HACD3Q9P035 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.6■□□□□ 0.25
HACD3Q9P035 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.6■□□□□ 0.25
HACD3Q9P035 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HACD3Q9P035 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.6■□□□□ 0.25
HACD3Q9P035 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.6■□□□□ 0.25
HACD3Q9P035 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.6■□□□□ 0.25
HACD3Q9P035 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.6■□□□□ 0.25
HACD3Q9P035 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HACD3Q9P035 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
HACD3Q9P035 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HACD3Q9P035 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms