Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 AL513190.1-201ENST00000621254 727 ntBASIC13.59□□□□□ -0.23
CALYQ9NYX4 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 U82695.1-201ENST00000635752 1889 ntBASIC13.59□□□□□ -0.23
CALYQ9NYX4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.59□□□□□ -0.23
CALYQ9NYX4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CALYQ9NYX4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CALYQ9NYX4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
CALYQ9NYX4 PCDHA1-201ENST00000378133 2726 ntBASIC13.58□□□□□ -0.24
CALYQ9NYX4 AC092919.2-201ENST00000623631 1645 ntBASIC13.58□□□□□ -0.24
CALYQ9NYX4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 AC002056.1-201ENST00000395613 760 ntBASIC13.58□□□□□ -0.24
CALYQ9NYX4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 AL161645.1-201ENST00000622716 1255 ntBASIC13.58□□□□□ -0.24
CALYQ9NYX4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CALYQ9NYX4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CALYQ9NYX4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 AC112191.1-201ENST00000523689 701 ntBASIC13.57□□□□□ -0.24
CALYQ9NYX4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.57□□□□□ -0.24
CALYQ9NYX4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CALYQ9NYX4 AL592424.1-201ENST00000563624 1536 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms