Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 SCARNA2-201ENST00000458748 420 ntBASIC14.39□□□□□ -0.11
ELL3Q9HB65 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.39□□□□□ -0.11
ELL3Q9HB65 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.39□□□□□ -0.11
ELL3Q9HB65 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ELL3Q9HB65 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 FAM197Y8-203ENST00000450145 560 ntBASIC14.38□□□□□ -0.11
ELL3Q9HB65 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 AC025062.2-201ENST00000605477 670 ntBASIC14.38□□□□□ -0.11
ELL3Q9HB65 AC148477.8-201ENST00000624298 468 ntBASIC14.38□□□□□ -0.11
ELL3Q9HB65 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 ME2P1-201ENST00000426028 1970 ntBASIC14.38□□□□□ -0.11
ELL3Q9HB65 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ELL3Q9HB65 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.38□□□□□ -0.11
ELL3Q9HB65 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.37□□□□□ -0.11
ELL3Q9HB65 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
ELL3Q9HB65 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ELL3Q9HB65 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms