Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 AC005332.1-201ENST00000577698 1310 ntBASIC20.2■□□□□ 0.82
UPF2Q9HAU5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UPF2Q9HAU5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 MYO15B-237ENST00000642007 4893 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 MIR648-201ENST00000385046 94 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AC104819.1-201ENST00000504587 486 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AP002414.4-201ENST00000589764 1148 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AC092329.2-201ENST00000598402 547 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AC066615.1-201ENST00000640911 628 ntBASIC20.19■□□□□ 0.82
UPF2Q9HAU5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPF2Q9HAU5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF2Q9HAU5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AC069224.1-201ENST00000566372 1715 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AC211429.1-201ENST00000415277 523 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 PAWRP1-201ENST00000451083 565 ntBASIC20.17■□□□□ 0.82
UPF2Q9HAU5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.17■□□□□ 0.82
UPF2Q9HAU5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms