Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 AL358472.5-202ENST00000641448 1267 ntBASIC19.04■□□□□ 0.64
SH2D4AQ9H788 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 TNRC18P3-201ENST00000441896 2691 ntBASIC19.04■□□□□ 0.64
SH2D4AQ9H788 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.04■□□□□ 0.64
SH2D4AQ9H788 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 BTBD7P1-201ENST00000447253 1453 ntBASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 RN7SL618P-201ENST00000477850 296 ntBASIC19.03■□□□□ 0.64
SH2D4AQ9H788 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 AC012645.4-201ENST00000610691 1061 ntBASIC19.03■□□□□ 0.64
SH2D4AQ9H788 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH2D4AQ9H788 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 SPTLC1P1-201ENST00000447199 261 ntBASIC19.02■□□□□ 0.64
SH2D4AQ9H788 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 AC005225.4-201ENST00000557330 545 ntBASIC19.02■□□□□ 0.64
SH2D4AQ9H788 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH2D4AQ9H788 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.02■□□□□ 0.63
SH2D4AQ9H788 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 AC105020.1-201ENST00000435356 2205 ntBASIC19.01■□□□□ 0.63
SH2D4AQ9H788 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 U82695.1-201ENST00000635752 1889 ntBASIC19.01■□□□□ 0.63
SH2D4AQ9H788 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.01■□□□□ 0.63
SH2D4AQ9H788 AL365330.1-201ENST00000607459 531 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms