Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.73■□□□□ 0.11
PIF1Q9H611 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.73■□□□□ 0.11
PIF1Q9H611 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.73■□□□□ 0.11
PIF1Q9H611 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.73■□□□□ 0.11
PIF1Q9H611 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.73■□□□□ 0.11
PIF1Q9H611 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.73■□□□□ 0.11
PIF1Q9H611 AL591684.3-201ENST00000605187 298 ntBASIC15.73■□□□□ 0.11
PIF1Q9H611 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.73■□□□□ 0.11
PIF1Q9H611 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PIF1Q9H611 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PIF1Q9H611 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 KRT8P39-201ENST00000396270 1433 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 AP005117.1-201ENST00000584346 1413 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 MPDU1-223ENST00000582151 728 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 AP001269.4-201ENST00000609611 512 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 AL121772.3-201ENST00000610840 674 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.72■□□□□ 0.11
PIF1Q9H611 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 AC002310.6-201ENST00000624451 1377 ntBASIC15.72■□□□□ 0.11
PIF1Q9H611 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PIF1Q9H611 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PIF1Q9H611 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 PCGF3-213ENST00000620529 1899 ntBASIC15.71■□□□□ 0.11
PIF1Q9H611 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PIF1Q9H611 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PIF1Q9H611 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
PIF1Q9H611 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms