Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 AL391256.1-201ENST00000443260 1855 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
HIPK3Q9H422 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIPK3Q9H422 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AL133338.1-201ENST00000565695 1517 ntBASIC17.78■□□□□ 0.44
HIPK3Q9H422 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIPK3Q9H422 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 GPAA1P2-202ENST00000606848 1787 ntBASIC17.78■□□□□ 0.44
HIPK3Q9H422 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.78■□□□□ 0.44
HIPK3Q9H422 AC009053.2-201ENST00000563701 2365 ntBASIC17.77■□□□□ 0.44
HIPK3Q9H422 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 ACTBP11-201ENST00000436287 1126 ntBASIC17.77■□□□□ 0.44
HIPK3Q9H422 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 USP32P1-208ENST00000506594 1164 ntBASIC17.77■□□□□ 0.44
HIPK3Q9H422 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.77■□□□□ 0.44
HIPK3Q9H422 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIPK3Q9H422 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.77■□□□□ 0.43
HIPK3Q9H422 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIPK3Q9H422 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms