Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.55■□□□□ 0.24
VPS11Q9H270 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS11Q9H270 MIR3652-201ENST00000579335 131 ntBASIC16.55■□□□□ 0.24
VPS11Q9H270 CYP2A7P1-201ENST00000595391 815 ntBASIC16.55■□□□□ 0.24
VPS11Q9H270 GPAA1P2-202ENST00000606848 1787 ntBASIC16.55■□□□□ 0.24
VPS11Q9H270 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS11Q9H270 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 AC006504.4-201ENST00000592118 1568 ntBASIC16.55■□□□□ 0.24
VPS11Q9H270 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS11Q9H270 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS11Q9H270 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 LINC01144-201ENST00000626198 1710 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 SLC22A20-204ENST00000530038 1673 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS11Q9H270 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.54■□□□□ 0.24
VPS11Q9H270 ELK2BP-201ENST00000415014 1224 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.54■□□□□ 0.24
VPS11Q9H270 KRT18P31-201ENST00000506277 1292 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.54■□□□□ 0.24
VPS11Q9H270 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.54■□□□□ 0.24
VPS11Q9H270 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.54■□□□□ 0.24
VPS11Q9H270 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
VPS11Q9H270 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 AL445228.2-201ENST00000605589 952 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 AL121772.3-201ENST00000610840 674 ntBASIC16.54■□□□□ 0.24
VPS11Q9H270 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
VPS11Q9H270 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.54■□□□□ 0.24
VPS11Q9H270 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VPS11Q9H270 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VPS11Q9H270 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VPS11Q9H270 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.53■□□□□ 0.24
VPS11Q9H270 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.53■□□□□ 0.24
VPS11Q9H270 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.53■□□□□ 0.24
VPS11Q9H270 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
VPS11Q9H270 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.53■□□□□ 0.24
VPS11Q9H270 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VPS11Q9H270 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.53■□□□□ 0.24
VPS11Q9H270 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.52■□□□□ 0.24
VPS11Q9H270 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms