Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBE2OQ9C0C9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBE2OQ9C0C9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBE2OQ9C0C9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.02■□□□□ 0.47
UBE2OQ9C0C9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBE2OQ9C0C9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 PDIA3P1-201ENST00000471856 1510 ntBASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 AC018665.1-201ENST00000622927 1362 ntBASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBE2OQ9C0C9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 PKD1P1-201ENST00000458669 6805 ntBASIC18■□□□□ 0.47
UBE2OQ9C0C9 AL513477.1-201ENST00000602865 2407 ntBASIC18■□□□□ 0.47
UBE2OQ9C0C9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 PFN1P12-201ENST00000455938 534 ntBASIC18■□□□□ 0.47
UBE2OQ9C0C9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AC010319.3-201ENST00000597028 470 ntBASIC18■□□□□ 0.47
UBE2OQ9C0C9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 AC018695.7-201ENST00000624587 2492 ntBASIC18■□□□□ 0.47
UBE2OQ9C0C9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBE2OQ9C0C9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
UBE2OQ9C0C9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 AC099336.1-201ENST00000417053 1171 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 FAM21FP-201ENST00000426241 1131 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 SDHAP3-202ENST00000515467 728 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 RNA5SP412-201ENST00000516234 123 ntBASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UBE2OQ9C0C9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms