Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 NORAD-201ENST00000565493 5339 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC069224.1-201ENST00000566372 1715 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 HCG4P8-203ENST00000443049 980 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 SCARNA2-201ENST00000458748 420 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 REXO1L6P-202ENST00000619970 1078 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AP001350.2-201ENST00000625104 1094 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.88□□□□□ -0.19
HDHD3Q9BSH5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 TSPY19P-201ENST00000418461 509 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 LAGE3P1-201ENST00000425356 484 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 UPK3BP1-201ENST00000428678 509 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 TSPY18P-201ENST00000441642 509 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AC091304.2-201ENST00000564639 760 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AC006557.2-201ENST00000592985 1240 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms