Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 ARMC10P1-201ENST00000313754 855 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 FOSL1P1-201ENST00000511041 816 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 MTDHP3-201ENST00000594186 672 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 AL445228.2-201ENST00000605589 952 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 REXO1L3P-201ENST00000622202 1288 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.5□□□□□ -0.41
VGLL1Q99990 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.5□□□□□ -0.41
VGLL1Q99990 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 PCGF3-213ENST00000620529 1899 ntBASIC12.5□□□□□ -0.41
VGLL1Q99990 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VGLL1Q99990 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.5□□□□□ -0.41
VGLL1Q99990 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
VGLL1Q99990 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.49□□□□□ -0.41
VGLL1Q99990 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VGLL1Q99990 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 GPAA1P2-202ENST00000606848 1787 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 PI4KAP1-204ENST00000612579 1703 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.49□□□□□ -0.41
VGLL1Q99990 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.49□□□□□ -0.41
VGLL1Q99990 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.49□□□□□ -0.41
VGLL1Q99990 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.49□□□□□ -0.41
VGLL1Q99990 PTCHD3P3-201ENST00000403073 906 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 MIR1224-201ENST00000408193 85 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 RBM17P3-201ENST00000417687 1192 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 PMS2P1-201ENST00000431037 1228 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 AC139887.3-201ENST00000568585 713 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.49□□□□□ -0.41
VGLL1Q99990 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.49□□□□□ -0.41
VGLL1Q99990 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.49□□□□□ -0.41
VGLL1Q99990 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.49□□□□□ -0.41
VGLL1Q99990 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.49□□□□□ -0.41
VGLL1Q99990 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VGLL1Q99990 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VGLL1Q99990 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VGLL1Q99990 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VGLL1Q99990 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VGLL1Q99990 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VGLL1Q99990 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms