Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.11■□□□□ 0.33
SMOQ99835 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMOQ99835 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SMOQ99835 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.1■□□□□ 0.33
SMOQ99835 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.1■□□□□ 0.33
SMOQ99835 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.1■□□□□ 0.33
SMOQ99835 AL138828.2-201ENST00000615812 383 ntBASIC17.1■□□□□ 0.33
SMOQ99835 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 AC073592.8-201ENST00000624126 511 ntBASIC17.1■□□□□ 0.33
SMOQ99835 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.1■□□□□ 0.33
SMOQ99835 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
SMOQ99835 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMOQ99835 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMOQ99835 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.09■□□□□ 0.33
SMOQ99835 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMOQ99835 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.09■□□□□ 0.33
SMOQ99835 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.09■□□□□ 0.33
SMOQ99835 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 AC006449.6-201ENST00000612330 2296 ntBASIC17.09■□□□□ 0.33
SMOQ99835 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMOQ99835 PCDH8P1-201ENST00000428983 2773 ntBASIC17.09■□□□□ 0.33
SMOQ99835 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMOQ99835 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMOQ99835 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.08■□□□□ 0.33
SMOQ99835 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMOQ99835 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.08■□□□□ 0.33
SMOQ99835 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMOQ99835 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMOQ99835 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.08■□□□□ 0.32
SMOQ99835 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMOQ99835 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.08■□□□□ 0.32
SMOQ99835 RPL37AP1-201ENST00000412502 279 ntBASIC17.08■□□□□ 0.32
SMOQ99835 HLA-V-204ENST00000476601 1289 ntBASIC17.08■□□□□ 0.32
SMOQ99835 AC093214.1-201ENST00000511688 1107 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms