Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 AC112482.1-201ENST00000492080 688 ntBASIC15.29■□□□□ 0.04
TM9SF2Q99805 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 AL691403.2-201ENST00000618460 490 ntBASIC15.29■□□□□ 0.04
TM9SF2Q99805 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF2Q99805 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF2Q99805 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AC018845.2-201ENST00000568326 409 ntBASIC15.28■□□□□ 0.04
TM9SF2Q99805 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF2Q99805 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF2Q99805 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 HLA-A-202ENST00000376806 1854 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF2Q99805 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 IGLL3P-201ENST00000412472 434 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 CXCL1P1-201ENST00000502804 216 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
TM9SF2Q99805 AC005829.1-201ENST00000570002 483 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 AC023141.13-201ENST00000604991 943 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 AC010507.1-201ENST00000633895 436 ntBASIC15.27■□□□□ 0.04
TM9SF2Q99805 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.27■□□□□ 0.03
TM9SF2Q99805 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 ALOX12P2-203ENST00000570921 1945 ntBASIC15.27■□□□□ 0.03
TM9SF2Q99805 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF2Q99805 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.27■□□□□ 0.03
TM9SF2Q99805 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms