Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.15□□□□□ -0.14
GFI1Q99684 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GFI1Q99684 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
GFI1Q99684 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GFI1Q99684 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GFI1Q99684 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GFI1Q99684 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1Q99684 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.15□□□□□ -0.15
GFI1Q99684 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.14□□□□□ -0.15
GFI1Q99684 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 IER3-202ENST00000376377 1350 ntBASIC14.14□□□□□ -0.15
GFI1Q99684 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
GFI1Q99684 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
GFI1Q99684 KRT16P4-201ENST00000453883 522 ntBASIC14.14□□□□□ -0.15
GFI1Q99684 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.14□□□□□ -0.15
GFI1Q99684 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.14□□□□□ -0.15
GFI1Q99684 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 AL160237.2-201ENST00000556165 472 ntBASIC14.14□□□□□ -0.15
GFI1Q99684 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 AC138894.3-201ENST00000603787 634 ntBASIC14.14□□□□□ -0.15
GFI1Q99684 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
GFI1Q99684 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GFI1Q99684 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
GFI1Q99684 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
GFI1Q99684 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
GFI1Q99684 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFI1Q99684 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GFI1Q99684 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.13□□□□□ -0.15
GFI1Q99684 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.13□□□□□ -0.15
GFI1Q99684 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.13□□□□□ -0.15
GFI1Q99684 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.13□□□□□ -0.15
GFI1Q99684 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 AL009178.2-201ENST00000597278 2719 ntBASIC14.13□□□□□ -0.15
GFI1Q99684 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFI1Q99684 RBM17P3-201ENST00000417687 1192 ntBASIC14.13□□□□□ -0.15
GFI1Q99684 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.13□□□□□ -0.15
GFI1Q99684 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.13□□□□□ -0.15
GFI1Q99684 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.13□□□□□ -0.15
GFI1Q99684 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
GFI1Q99684 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms