Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AC005034.1-201ENST00000426657 489 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 PRYP6-201ENST00000514804 343 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AL035252.4-201ENST00000624174 288 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AC084018.2-201ENST00000613093 2607 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AL671710.1-201ENST00000610245 2349 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 AC092068.3-201ENST00000587894 2016 ntBASIC13.34□□□□□ -0.27
ZNF48Q96MX3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ZNF48Q96MX3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ZNF48Q96MX3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.33□□□□□ -0.28
ZNF48Q96MX3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 TSSK5P-201ENST00000423978 907 ntBASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 SERBP1P5-201ENST00000510079 1181 ntBASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 AL590560.3-201ENST00000623350 461 ntBASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ZNF48Q96MX3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms