Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 AL353705.2-201ENST00000428243 662 ntBASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 AC106028.4-201ENST00000614509 607 ntBASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.69□□□□□ -0.38
UBE2E2Q96LR5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 KLF2P3-201ENST00000451977 1087 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RNA5SP410-201ENST00000516285 106 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AC051619.7-201ENST00000568314 623 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AL365330.1-201ENST00000607459 531 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AC008677.1-201ENST00000519230 1561 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 AC005622.1-201ENST00000636801 1703 ntBASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2E2Q96LR5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2E2Q96LR5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UBE2E2Q96LR5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2E2Q96LR5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2E2Q96LR5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UBE2E2Q96LR5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms