Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC105020.1-201ENST00000435356 2205 ntBASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM47Q96LD4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AC245100.3-201ENST00000441281 285 ntBASIC19.13■□□□□ 0.65
TRIM47Q96LD4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AC073389.1-201ENST00000595595 795 ntBASIC19.13■□□□□ 0.65
TRIM47Q96LD4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AL162274.1-201ENST00000617191 1098 ntBASIC19.13■□□□□ 0.65
TRIM47Q96LD4 TOP3BP1-201ENST00000420768 1380 ntBASIC19.13■□□□□ 0.65
TRIM47Q96LD4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 AGGF1P2-201ENST00000426656 2106 ntBASIC19.13■□□□□ 0.65
TRIM47Q96LD4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM47Q96LD4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 GNAQP1-201ENST00000444815 1067 ntBASIC19.12■□□□□ 0.65
TRIM47Q96LD4 ACA64.2-201ENST00000459014 129 ntBASIC19.12■□□□□ 0.65
TRIM47Q96LD4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AC132938.2-201ENST00000579188 680 ntBASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AL591163.1-201ENST00000641757 987 ntBASIC19.12■□□□□ 0.65
TRIM47Q96LD4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.12■□□□□ 0.65
TRIM47Q96LD4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM47Q96LD4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 FOXO1B-201ENST00000504678 1527 ntBASIC19.11■□□□□ 0.65
TRIM47Q96LD4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 AL512384.1-201ENST00000406683 331 ntBASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 RPL37AP1-201ENST00000412502 279 ntBASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms