Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.51■□□□□ 0.39
ALPK3Q96L96 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALPK3Q96L96 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 FNTAP2-201ENST00000430308 634 ntBASIC17.5■□□□□ 0.39
ALPK3Q96L96 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 HOMER2P2-201ENST00000451621 847 ntBASIC17.5■□□□□ 0.39
ALPK3Q96L96 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 EEF1DP1-201ENST00000585891 896 ntBASIC17.5■□□□□ 0.39
ALPK3Q96L96 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
ALPK3Q96L96 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 AL512652.2-201ENST00000625156 1716 ntBASIC17.5■□□□□ 0.39
ALPK3Q96L96 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALPK3Q96L96 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 C2orf27AP3-201ENST00000434123 579 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 EEF1DP6-201ENST00000449232 372 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 AC245884.6-201ENST00000515672 1067 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 FGFR3P5-201ENST00000564496 886 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL354718.3-201ENST00000616414 581 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 CR382287.1-201ENST00000623954 586 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL139011.1-202ENST00000642063 584 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALPK3Q96L96 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.49■□□□□ 0.39
ALPK3Q96L96 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.49■□□□□ 0.39
ALPK3Q96L96 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALPK3Q96L96 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALPK3Q96L96 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ALPK3Q96L96 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms