Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC051619.7-201ENST00000568314 623 ntBASIC17.3■□□□□ 0.36
ATP2A3Q93084 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A3Q93084 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2A3Q93084 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP2A3Q93084 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A3Q93084 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A3Q93084 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A3Q93084 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A3Q93084 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A3Q93084 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP2A3Q93084 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A3Q93084 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 KLF2P3-201ENST00000451977 1087 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 DUX4L27-201ENST00000554796 1261 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 MPDU1-223ENST00000582151 728 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 AC084121.4-201ENST00000641598 221 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 AF228730.8-201ENST00000642140 221 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 AC063926.3-201ENST00000624734 5658 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 AC046158.3-201ENST00000624947 2558 ntBASIC17.29■□□□□ 0.36
ATP2A3Q93084 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP2A3Q93084 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP2A3Q93084 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 SPDYE7P-202ENST00000420373 878 ntBASIC17.28■□□□□ 0.36
ATP2A3Q93084 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 AC125807.1-201ENST00000483097 614 ntBASIC17.28■□□□□ 0.36
ATP2A3Q93084 AC093214.1-201ENST00000511688 1107 ntBASIC17.28■□□□□ 0.36
ATP2A3Q93084 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 AC008267.7-201ENST00000624570 1194 ntBASIC17.28■□□□□ 0.36
ATP2A3Q93084 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 KRT8P49-201ENST00000604166 1432 ntBASIC17.28■□□□□ 0.36
ATP2A3Q93084 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP2A3Q93084 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP2A3Q93084 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms