Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 TUBB3P1-201ENST00000405796 1332 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC132872.4-202ENST00000622924 2756 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 HMGA1P7-201ENST00000406908 502 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 KLF2P3-201ENST00000451977 1087 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC069262.1-201ENST00000539058 672 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 DUX4L17-201ENST00000557360 1267 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 AC243562.1-201ENST00000560672 389 ntBASIC15.52■□□□□ 0.08
TM9SF4Q92544 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF4Q92544 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF4Q92544 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.52■□□□□ 0.07
TM9SF4Q92544 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TM9SF4Q92544 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF4Q92544 UXT-AS1-201ENST00000590504 1525 ntBASIC15.52■□□□□ 0.07
TM9SF4Q92544 CYP2T1P-202ENST00000641596 2535 ntBASIC15.52■□□□□ 0.07
TM9SF4Q92544 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TM9SF4Q92544 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 AC107890.1-201ENST00000422478 521 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 RBPMS2P1-201ENST00000437762 623 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 AC125807.1-201ENST00000483097 614 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 AC190387.1-201ENST00000551683 408 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 AC007950.2-201ENST00000615045 2347 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 LINC00554-201ENST00000564841 3011 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.51■□□□□ 0.07
TM9SF4Q92544 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.51■□□□□ 0.07
TM9SF4Q92544 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF4Q92544 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TM9SF4Q92544 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TM9SF4Q92544 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms