Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC44A1Q8WWI5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AF238378.1-201ENST00000526806 358 ntBASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SLC44A1Q8WWI5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AC006058.4-201ENST00000624016 1670 ntBASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 OR7E47P-204ENST00000575924 449 ntBASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 SSR4P1-203ENST00000599569 2260 ntBASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC44A1Q8WWI5 AC092850.2-201ENST00000623821 2697 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms