Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC027796.2-201ENST00000575326 344 ntBASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AC078925.2-201ENST00000624013 1973 ntBASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 LINC00628-201ENST00000628516 1289 ntBASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 HLA-J-203ENST00000494367 1087 ntBASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC109322.1-201ENST00000524499 1264 ntBASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 FLJ16779-201ENST00000612722 7638 ntBASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FNDC9Q8TBE3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 PCDHA14-201ENST00000506751 2298 ntBASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 AL031731.1-201ENST00000642131 2094 ntBASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FNDC9Q8TBE3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.77□□□□□ -0.05
FNDC9Q8TBE3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms