Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.19■□□□□ 0.34
SHKBP1Q8TBC3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 MTND6P24-201ENST00000440466 518 ntBASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHKBP1Q8TBC3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AL596257.1-201ENST00000641463 2694 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 RNA5SP410-201ENST00000516285 106 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AP005018.1-201ENST00000525475 301 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 RN7SL828P-201ENST00000607615 303 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AC009118.2-201ENST00000613275 655 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TEX28P1-201ENST00000613479 1221 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TEX28P2-201ENST00000617764 1221 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AC132872.4-202ENST00000622924 2756 ntBASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.17■□□□□ 0.34
SHKBP1Q8TBC3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms