Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DUX4L17-201ENST00000557360 1267 ntBASIC14.24□□□□□ -0.13
BEST4Q8NFU0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 CICP24-201ENST00000605464 2705 ntBASIC14.24□□□□□ -0.13
BEST4Q8NFU0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 AC073508.3-201ENST00000619697 1419 ntBASIC14.24□□□□□ -0.13
BEST4Q8NFU0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BEST4Q8NFU0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AK4P3-201ENST00000418260 669 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ACTG1P4-201ENST00000425123 1122 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC246785.2-201ENST00000432512 513 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC083849.1-201ENST00000615227 514 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 AC006449.6-201ENST00000612330 2296 ntBASIC14.23□□□□□ -0.13
BEST4Q8NFU0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.23□□□□□ -0.13
BEST4Q8NFU0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BEST4Q8NFU0 AL596275.1-201ENST00000423464 877 ntBASIC14.22□□□□□ -0.13
BEST4Q8NFU0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms