Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
C3orf56Q8N813 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
C3orf56Q8N813 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC124067.4-201ENST00000519691 2379 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 WIZP1-201ENST00000531444 2299 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC092506.1-202ENST00000401022 528 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC004945.1-201ENST00000416738 983 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 SNX29P1-201ENST00000548357 1007 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AL512361.1-201ENST00000554200 418 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC008735.3-201ENST00000596646 500 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 FOXO1B-201ENST00000504678 1527 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC073439.1-201ENST00000624121 1774 ntBASIC12.81□□□□□ -0.36
C3orf56Q8N813 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.81□□□□□ -0.36
C3orf56Q8N813 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
C3orf56Q8N813 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C3orf56Q8N813 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 CROCCP4-201ENST00000457096 498 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 SPDYE18-201ENST00000510091 1050 ntBASIC12.8□□□□□ -0.36
C3orf56Q8N813 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.8□□□□□ -0.36
C3orf56Q8N813 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms