Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AL121912.1-201ENST00000603683 238 ntBASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 LINC02447-202ENST00000501888 2146 ntBASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 AC010491.1-201ENST00000563101 2797 ntBASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN22Q8N7P3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LINC02228-204ENST00000642115 2962 ntBASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 AC069224.1-201ENST00000566372 1715 ntBASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 AC018712.1-201ENST00000455767 687 ntBASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 RN7SL510P-201ENST00000581311 263 ntBASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 PGM5P2-202ENST00000637225 1043 ntBASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN22Q8N7P3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 FAM45BP-202ENST00000592932 1624 ntBASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN22Q8N7P3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms