Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC008677.1-201ENST00000519230 1561 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC069224.1-201ENST00000566372 1715 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AP000842.3-202ENST00000569238 1080 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC005829.1-201ENST00000570002 483 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 AL365203.3-201ENST00000609742 2057 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00311Q8N616 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00311Q8N616 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 TNRC18P3-201ENST00000441896 2691 ntBASIC13.26□□□□□ -0.29
LINC00311Q8N616 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00311Q8N616 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00311Q8N616 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 CDC14C-201ENST00000428251 1719 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 FOXO1B-201ENST00000504678 1527 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 FAM220BP-201ENST00000377689 816 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SPCS2P4-201ENST00000436160 681 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 ALG1L5P-201ENST00000482043 771 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 AC079140.1-201ENST00000508039 487 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 YBX1P5-201ENST00000509441 847 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 KRT8P48-201ENST00000515599 1220 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 IGHV3-62-201ENST00000520057 340 ntBASIC13.25□□□□□ -0.29
LINC00311Q8N616 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00311Q8N616 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00311Q8N616 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AC024909.3-201ENST00000611513 2257 ntBASIC13.24□□□□□ -0.29
LINC00311Q8N616 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms