Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCML4Q8N228 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCML4Q8N228 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCML4Q8N228 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SCML4Q8N228 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.95■□□□□ 0.3
SCML4Q8N228 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SCML4Q8N228 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.95■□□□□ 0.3
SCML4Q8N228 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.95■□□□□ 0.3
SCML4Q8N228 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.95■□□□□ 0.3
SCML4Q8N228 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCML4Q8N228 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCML4Q8N228 AC006449.5-201ENST00000610658 2098 ntBASIC16.95■□□□□ 0.3
SCML4Q8N228 AL691432.1-201ENST00000596308 1422 ntBASIC16.95■□□□□ 0.3
SCML4Q8N228 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.95■□□□□ 0.3
SCML4Q8N228 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.95■□□□□ 0.3
SCML4Q8N228 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.94■□□□□ 0.3
SCML4Q8N228 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 AP001282.1-201ENST00000531301 1499 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.94■□□□□ 0.3
SCML4Q8N228 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.94■□□□□ 0.3
SCML4Q8N228 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.94■□□□□ 0.3
SCML4Q8N228 HAUS4P1-201ENST00000406739 1145 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 EEF1DP4-201ENST00000446006 880 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 AC069120.2-201ENST00000524091 540 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.94■□□□□ 0.3
SCML4Q8N228 AC027796.2-201ENST00000575326 344 ntBASIC16.94■□□□□ 0.3
SCML4Q8N228 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.94■□□□□ 0.3
SCML4Q8N228 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SCML4Q8N228 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.94■□□□□ 0.3
SCML4Q8N228 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
SCML4Q8N228 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SCML4Q8N228 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCML4Q8N228 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SCML4Q8N228 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SCML4Q8N228 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.93■□□□□ 0.3
SCML4Q8N228 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.93■□□□□ 0.3
SCML4Q8N228 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.93■□□□□ 0.3
SCML4Q8N228 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 AC004987.2-201ENST00000395959 1148 ntBASIC16.93■□□□□ 0.3
SCML4Q8N228 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.93■□□□□ 0.3
SCML4Q8N228 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SCML4Q8N228 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SCML4Q8N228 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.93■□□□□ 0.3
SCML4Q8N228 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.93■□□□□ 0.3
SCML4Q8N228 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCML4Q8N228 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
SCML4Q8N228 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms