Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AC073389.1-201ENST00000595595 795 ntBASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 AL589702.1-201ENST00000641229 1509 ntBASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 U82695.1-201ENST00000635752 1889 ntBASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CNN2P11-201ENST00000429351 262 ntBASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 KRT8P23-201ENST00000560090 1207 ntBASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 AC004835.2-201ENST00000603762 682 ntBASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SCUBE3Q8IX30 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 FAM58DP-201ENST00000428076 619 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CYMP-203ENST00000474680 1263 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SLC25A39P2-201ENST00000537614 270 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 RN7SL602P-201ENST00000578326 324 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SPTSSB-204ENST00000617024 1292 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AC084121.4-201ENST00000641598 221 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AF228730.8-201ENST00000642140 221 ntBASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCUBE3Q8IX30 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms