Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB11FIP4Q86YS3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 RPS8P6-201ENST00000426177 609 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SPCS2P4-201ENST00000436160 681 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SPDYE11-202ENST00000450699 704 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SPDYE9P-201ENST00000570642 692 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 MIR3687-2-201ENST00000577708 61 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 AC026120.1-201ENST00000611536 926 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SPDYE10P-202ENST00000612005 668 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SPDYE8P-202ENST00000612377 668 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 MIR3687-1-201ENST00000614492 61 ntBASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB11FIP4Q86YS3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AC132872.4-202ENST00000622924 2756 ntBASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 MKNK2P1-201ENST00000437526 628 ntBASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 AP003680.1-201ENST00000598970 3660 ntBASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB11FIP4Q86YS3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB11FIP4Q86YS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms