Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.57■□□□□ 0.24
DENND4AQ7Z401 AL359711.2-201ENST00000563105 872 ntBASIC16.57■□□□□ 0.24
DENND4AQ7Z401 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DENND4AQ7Z401 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 AC074338.1-201ENST00000416825 156 ntBASIC16.56■□□□□ 0.24
DENND4AQ7Z401 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 KRT18P64-201ENST00000434946 1219 ntBASIC16.56■□□□□ 0.24
DENND4AQ7Z401 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 RN7SL560P-201ENST00000577943 264 ntBASIC16.56■□□□□ 0.24
DENND4AQ7Z401 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 RHOXF1P1-202ENST00000635473 501 ntBASIC16.56■□□□□ 0.24
DENND4AQ7Z401 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 AP000812.2-201ENST00000538934 718 ntBASIC16.56■□□□□ 0.24
DENND4AQ7Z401 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
DENND4AQ7Z401 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DENND4AQ7Z401 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms