Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AL023775.1-201ENST00000454907 1746 ntBASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 MIR4750-201ENST00000584564 56 ntBASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 CU633904.3-201ENST00000624042 1029 ntBASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RGPD4Q7Z3J3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AL627389.1-201ENST00000413508 1182 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AC104784.1-201ENST00000473096 294 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 NUP210P1-202ENST00000504322 710 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AC013355.1-201ENST00000562625 723 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AL645939.5-201ENST00000606834 243 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AC145423.3-201ENST00000615987 467 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AC091544.8-201ENST00000619490 361 ntBASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RGPD4Q7Z3J3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 AC114501.1-201ENST00000445949 172 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 RN7SL181P-201ENST00000462921 277 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 RN7SL11P-201ENST00000471305 293 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 ECM1P1-201ENST00000604092 1279 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 AC008132.1-202ENST00000342005 1389 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 AL354989.2-201ENST00000435838 1540 ntBASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RGPD4Q7Z3J3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AP001582.1-201ENST00000525856 295 ntBASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.23■□□□□ 0.83
RGPD4Q7Z3J3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms