Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AL596087.1-201ENST00000400979 1969 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 KRT18P67-201ENST00000432816 1264 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 HNRNPDP1-201ENST00000439535 754 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 SIGLEC30P-201ENST00000455569 941 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 SLC25A6P4-201ENST00000586535 553 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AC025062.2-201ENST00000605477 670 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AL022326.1-202ENST00000641533 845 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AL365209.1-201ENST00000624418 6473 ntBASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 AL645728.1-201ENST00000366221 2101 ntBASIC15.21■□□□□ 0.03
TUBA1AQ71U36 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.21■□□□□ 0.03
TUBA1AQ71U36 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 AL049840.3-201ENST00000602669 611 ntBASIC15.21■□□□□ 0.03
TUBA1AQ71U36 AC064862.7-201ENST00000604520 867 ntBASIC15.21■□□□□ 0.03
TUBA1AQ71U36 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.21■□□□□ 0.03
TUBA1AQ71U36 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TUBA1AQ71U36 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 SIGLEC16-201ENST00000599858 1437 ntBASIC15.2■□□□□ 0.02
TUBA1AQ71U36 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBA1AQ71U36 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms