Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NHLRC1Q6VVB1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AL591424.1-201ENST00000442569 1213 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AL671883.3-201ENST00000603274 991 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AC020765.3-201ENST00000613051 740 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 PCGF3-213ENST00000620529 1899 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 AC092364.2-201ENST00000596710 2692 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 MTHFR-217ENST00000641820 1569 ntBASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
NHLRC1Q6VVB1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 MIR574-201ENST00000385209 96 ntBASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 KRT18P3-201ENST00000451602 1288 ntBASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 PGAM5P1-201ENST00000518923 814 ntBASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 PDPK2P-202ENST00000562415 1191 ntBASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AP002472.1-201ENST00000577490 586 ntBASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NHLRC1Q6VVB1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
NHLRC1Q6VVB1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms