Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
KCNIP4Q6PIL6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TSPY7P-201ENST00000431358 1114 ntBASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 SNORA78-201ENST00000459373 127 ntBASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 BX088651.1-201ENST00000540551 451 ntBASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 Z99916.2-201ENST00000604037 246 ntBASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KCNIP4Q6PIL6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 AC112504.1-201ENST00000623415 1841 ntBASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 MIR1238-201ENST00000408483 83 ntBASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 WWOX-216ENST00000569818 525 ntBASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KCNIP4Q6PIL6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 DMBT1P1-203ENST00000636837 4628 ntBASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KCNIP4Q6PIL6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms