Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC62Q6P9F0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC62Q6P9F0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 BTBD7P1-201ENST00000447253 1453 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CR383656.12-201ENST00000549567 513 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC027307.3-201ENST00000594262 1100 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 AC105020.1-201ENST00000435356 2205 ntBASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC62Q6P9F0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 KRT8P12-202ENST00000472924 1397 ntBASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 NME2P1-201ENST00000426182 414 ntBASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 API5-211ENST00000534695 560 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 AL358472.5-202ENST00000641448 1267 ntBASIC18.34■□□□□ 0.53
CCDC62Q6P9F0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms