Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MIR1247-201ENST00000408206 136 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 FAM21FP-201ENST00000426241 1131 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC134915.1-201ENST00000426461 574 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AP000812.2-201ENST00000538934 718 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 DERL2-202ENST00000570848 657 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC097359.3-201ENST00000603982 1210 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 APOC3-202ENST00000375345 604 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 KRT18P43-201ENST00000469825 1281 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 DUX4L45-201ENST00000566406 1057 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 CLUHP6-201ENST00000580789 941 ntBASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC24.3■■□□□ 1.48
CDC42BPAQ5VT25 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AL133338.1-201ENST00000565695 1517 ntBASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 ACTBP11-201ENST00000436287 1126 ntBASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 MIR6869-201ENST00000619434 62 ntBASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AL121723.1-201ENST00000445194 1519 ntBASIC24.29■■□□□ 1.48
CDC42BPAQ5VT25 AP001282.1-201ENST00000531301 1499 ntBASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 TPO-206ENST00000382269 1155 ntTSL 5 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 BCRP2-202ENST00000447763 634 ntBASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 BCRP6-201ENST00000510112 632 ntBASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 BCRP7-201ENST00000511549 544 ntBASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC24.28■■□□□ 1.48
CDC42BPAQ5VT25 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 AC134407.2-201ENST00000625089 1978 ntBASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 TEX30-203ENST00000376022 828 ntTSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 GZMB-202ENST00000382540 816 ntTSL 5 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms