Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 KRT8P12-202ENST00000472924 1397 ntBASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNFT1Q5M7Z0 AC007541.1-201ENST00000570282 1469 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 SPDYE17-201ENST00000412399 783 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 RN7SL692P-201ENST00000464677 288 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 SPDYE18-201ENST00000510091 1050 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 API5-211ENST00000534695 560 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 AC104794.3-201ENST00000566840 1248 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 AC027307.3-201ENST00000594262 1100 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 AL132655.2-201ENST00000596276 594 ntBASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNFT1Q5M7Z0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 U82695.1-201ENST00000635752 1889 ntBASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 NME2P1-201ENST00000426182 414 ntBASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AKR1B10P2-201ENST00000577332 927 ntBASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AC026979.3-201ENST00000607315 403 ntBASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 AL033527.5-202ENST00000641632 1098 ntBASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
RNFT1Q5M7Z0 LINC01144-201ENST00000626198 1710 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms