Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCS1Q01581 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGCS1Q01581 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
HMGCS1Q01581 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.13
HMGCS1Q01581 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.83■□□□□ 0.13
HMGCS1Q01581 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 RNA5SP415-201ENST00000517246 115 ntBASIC15.83■□□□□ 0.12
HMGCS1Q01581 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 PRAL-201ENST00000624952 3286 ntBASIC15.83■□□□□ 0.12
HMGCS1Q01581 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGCS1Q01581 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
HMGCS1Q01581 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 CRYGEP-201ENST00000412192 528 ntBASIC15.82■□□□□ 0.12
HMGCS1Q01581 AC093909.1-201ENST00000504731 1122 ntBASIC15.82■□□□□ 0.12
HMGCS1Q01581 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 AL031432.2-201ENST00000566714 459 ntBASIC15.82■□□□□ 0.12
HMGCS1Q01581 AL928711.1-201ENST00000570165 459 ntBASIC15.82■□□□□ 0.12
HMGCS1Q01581 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 AC021097.1-201ENST00000607902 574 ntBASIC15.82■□□□□ 0.12
HMGCS1Q01581 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HMGCS1Q01581 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms