Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC9.91□□□□□ -0.82
HSPG2P98160 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 RN7SL774P-201ENST00000577467 290 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC9.91□□□□□ -0.82
HSPG2P98160 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
HSPG2P98160 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 RN7SL8P-201ENST00000461771 266 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 ATP6V0CP2-201ENST00000469409 207 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 COX5BP1-201ENST00000507622 393 ntBASIC9.91□□□□□ -0.82
HSPG2P98160 KLK11-210ENST00000600362 759 ntTSL 3 BASIC9.91□□□□□ -0.82
HSPG2P98160 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
HSPG2P98160 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 MIR769-201ENST00000390225 118 ntBASIC9.9□□□□□ -0.82
HSPG2P98160 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
HSPG2P98160 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 AC116353.5-201ENST00000638148 1699 ntBASIC9.9□□□□□ -0.82
HSPG2P98160 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.9□□□□□ -0.82
HSPG2P98160 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
HSPG2P98160 RPSAP31-201ENST00000416648 895 ntBASIC9.9□□□□□ -0.82
HSPG2P98160 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 KRT8P35-201ENST00000483942 1338 ntBASIC9.9□□□□□ -0.82
HSPG2P98160 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
HSPG2P98160 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
HSPG2P98160 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
HSPG2P98160 PCDHB17P-201ENST00000539533 2393 ntBASIC9.9□□□□□ -0.82
HSPG2P98160 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC9.9□□□□□ -0.82
HSPG2P98160 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC9.9□□□□□ -0.82
HSPG2P98160 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC9.9□□□□□ -0.83
HSPG2P98160 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC9.9□□□□□ -0.83
HSPG2P98160 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC9.9□□□□□ -0.83
HSPG2P98160 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC9.9□□□□□ -0.83
HSPG2P98160 AC022217.1-201ENST00000521069 738 ntBASIC9.9□□□□□ -0.83
HSPG2P98160 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC9.9□□□□□ -0.83
HSPG2P98160 BOC-212ENST00000485230 2173 ntTSL 2 BASIC9.9□□□□□ -0.83
HSPG2P98160 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC9.9□□□□□ -0.83
HSPG2P98160 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
HSPG2P98160 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
HSPG2P98160 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC9.9□□□□□ -0.83
HSPG2P98160 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
HSPG2P98160 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms