Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.65□□□□□ -0.54
RPL39P62891 AC023157.3-201ENST00000619086 2088 ntBASIC11.65□□□□□ -0.54
RPL39P62891 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 SPDYE21P-201ENST00000413323 827 ntBASIC11.65□□□□□ -0.54
RPL39P62891 AK4P3-201ENST00000418260 669 ntBASIC11.65□□□□□ -0.54
RPL39P62891 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.65□□□□□ -0.54
RPL39P62891 POU5F1P6-201ENST00000466990 990 ntBASIC11.65□□□□□ -0.54
RPL39P62891 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.65□□□□□ -0.54
RPL39P62891 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 AP005901.3-202ENST00000581653 237 ntBASIC11.65□□□□□ -0.54
RPL39P62891 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.65□□□□□ -0.54
RPL39P62891 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.65□□□□□ -0.54
RPL39P62891 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 KRT8P39-201ENST00000396270 1433 ntBASIC11.65□□□□□ -0.54
RPL39P62891 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 AC069224.1-201ENST00000566372 1715 ntBASIC11.65□□□□□ -0.54
RPL39P62891 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RPL39P62891 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.65□□□□□ -0.54
RPL39P62891 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RPL39P62891 TOP3BP1-201ENST00000420768 1380 ntBASIC11.65□□□□□ -0.55
RPL39P62891 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.65□□□□□ -0.55
RPL39P62891 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RPL39P62891 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
RPL39P62891 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
RPL39P62891 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RPL39P62891 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.65□□□□□ -0.55
RPL39P62891 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
RPL39P62891 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.64□□□□□ -0.55
RPL39P62891 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RPL39P62891 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.64□□□□□ -0.55
RPL39P62891 AC011498.5-201ENST00000592027 486 ntBASIC11.64□□□□□ -0.55
RPL39P62891 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.64□□□□□ -0.55
RPL39P62891 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
RPL39P62891 TMEM191A-211ENST00000637163 1067 ntBASIC11.64□□□□□ -0.55
RPL39P62891 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RPL39P62891 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
RPL39P62891 AC136621.1-201ENST00000624017 2304 ntBASIC11.64□□□□□ -0.55
RPL39P62891 GPAA1P2-202ENST00000606848 1787 ntBASIC11.64□□□□□ -0.55
RPL39P62891 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms